Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20lychnidis-
dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 273 7e-71
>seq1095
Length=2939
Score = 273 bits (302), Expect = 7e-71
Identities = 358/485 (74%), Gaps = 13/485 (3%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| ||| |||||| ||| ||| ||||||||||||||| |||||||||||||
Sbjct 690 CGAGTCTGAATAGGGCGTTTAGTACGTGGTCGTAGACCCGAAACCAGGTGATCTACCCAT 749
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
| ||||| ||||| | |||||||| |||||| |||||||||| | |||||||| |
Sbjct 750 GTCCAGGGTGAAGTTCAGGTAACACTGAATGGAGGCCCGAACCCACGCACGTTGAAAAGT 809
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
||||||||| ||||||||| || |||| | || | ||| |||| |||||||||||||
Sbjct 810 GCGGGGATGAGGTGTGGGTAGCGGAGAAATTCCAATCGAACCTGGAGATAGCTGGTTCTC 869
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC--GGGGGTAGAGCACTGTTAT 238
|||||| |||||| |||| |||| | | || || |||||||||||| |
Sbjct 870 CCCGAAATAGCTTTAGGGCTAGCCTTAAGTGTAAGAGTCTTGGAGGTAGAGCACTGATTG 929
Query 239 GGCTAGGGG--GTCATTGCGACTTACC-AAACCATTGCAAACTCCGAATGCGCATCAGTT 295
| ||||||| |||| || ||||| || || | |||||||||||||| || | ||
Sbjct 930 GACTAGGGGTCCTCAT--CGGATTACCGAATTCAGT-CAAACTCCGAATGCCAATGACTT 986
Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
| || ||||| || | ||| |||| ||||| | | ||| || | || ||
Sbjct 987 AT-CCTTAGGAGTCAGACTGCGAGTGATAAGATCCGTAGTCAAAAGGGAAACAGCCCAGA 1045
Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415
| ||||||||| ||| || || ||||| || || || || ||||| |||
Sbjct 1046 CCGCCAGCTAAGGTCCCAAAGTGTGTATTAAGTGGAA--AAGGATGTGGAGTTGCTTAGA 1103
Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475
|| ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||
Sbjct 1104 CAACTAGGATGTTGGCTTAGAAGCAGCCA-CCATTTAAAGAGTGCGTAATAGCTCACTAG 1162
Query 476 TCGAG 480
|||||
Sbjct 1163 TCGAG 1167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689508001280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |