Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1095 273 7e-71 >seq1095 Length=2939 Score = 273 bits (302), Expect = 7e-71 Identities = 358/485 (74%), Gaps = 13/485 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| ||| ||| ||||||||||||||| ||||||||||||| Sbjct 690 CGAGTCTGAATAGGGCGTTTAGTACGTGGTCGTAGACCCGAAACCAGGTGATCTACCCAT 749 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | ||||| ||||| | |||||||| |||||| |||||||||| | |||||||| | Sbjct 750 GTCCAGGGTGAAGTTCAGGTAACACTGAATGGAGGCCCGAACCCACGCACGTTGAAAAGT 809 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||| ||||||||| || |||| | || | ||| |||| ||||||||||||| Sbjct 810 GCGGGGATGAGGTGTGGGTAGCGGAGAAATTCCAATCGAACCTGGAGATAGCTGGTTCTC 869 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATC--GGGGGTAGAGCACTGTTAT 238 |||||| |||||| |||| |||| | | || || |||||||||||| | Sbjct 870 CCCGAAATAGCTTTAGGGCTAGCCTTAAGTGTAAGAGTCTTGGAGGTAGAGCACTGATTG 929 Query 239 GGCTAGGGG--GTCATTGCGACTTACC-AAACCATTGCAAACTCCGAATGCGCATCAGTT 295 | ||||||| |||| || ||||| || || | |||||||||||||| || | || Sbjct 930 GACTAGGGGTCCTCAT--CGGATTACCGAATTCAGT-CAAACTCCGAATGCCAATGACTT 986 Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 | || ||||| || | ||| |||| ||||| | | ||| || | || || Sbjct 987 AT-CCTTAGGAGTCAGACTGCGAGTGATAAGATCCGTAGTCAAAAGGGAAACAGCCCAGA 1045 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 | ||||||||| ||| || || ||||| || || || || ||||| ||| Sbjct 1046 CCGCCAGCTAAGGTCCCAAAGTGTGTATTAAGTGGAA--AAGGATGTGGAGTTGCTTAGA 1103 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 || ||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| Sbjct 1104 CAACTAGGATGTTGGCTTAGAAGCAGCCA-CCATTTAAAGAGTGCGTAATAGCTCACTAG 1162 Query 476 TCGAG 480 ||||| Sbjct 1163 TCGAG 1167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689508001280