Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1095 129 1e-27 >seq1095 Length=2939 Score = 129 bits (142), Expect = 1e-27 Identities = 184/252 (73%), Gaps = 13/252 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 || || || ||||||||||||| | | || |||||||||||| | || | |||| Sbjct 23 AGGGCGCACGGTGGATGCCTTGACACTAGGAGTCGATGAAGGACGGGACTAACGC-CGAT 81 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||||||| | || | |||||||||| |||||||||||||||||||||| Sbjct 82 ATGCTTCGGGGAGCT-GTAAGTAAGCTTTGATCCGAAGATTTCCGAATGGGGAAACCCAC 140 Query 120 C---CCTTTGGGTCATTGCATGCT-----GAATACATAGG-TATGCAAAGCGAACGCGGC 170 | | | ||| || | || || ||||||||||| || | || | || | | Sbjct 141 CATACGTAATGGT-ATGGTATCCTTATCTGAATACATAGGGTAAGGAAGACAGACCCAGG 199 Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||||||||||||||||||| ||| ||||| ||||| ||| | |||| || ||||| || Sbjct 200 GAACTGAAACATCTAAGTACCTGGAGGAAGAGAAAGCAAATGCGATTTCCTGAGTAGCGG 259 Query 231 CGAGCGAAATGG 242 ||||||||| || Sbjct 260 CGAGCGAAACGG 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918349993120