Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1062 426 5e-117 seq1417 369 1e-99 >seq1062 Length=3126 Score = 426 bits (472), Expect = 5e-117 Identities = 242/246 (98%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 214 AGGGTCTTCTTTCCCCGCTTATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 273 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 274 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 333 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 334 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 393 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 394 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCAC 453 Query 538 TTTCTG 543 |||||| Sbjct 454 TTTCTG 459 >seq1417 Length=1715 Score = 369 bits (408), Expect = 1e-99 Identities = 259/292 (89%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 482 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATT 423 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 422 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 363 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| |||| || ||| || || |||| ||||| ||||||| Sbjct 362 AGCCCGCGAAGGACCTTAATGCCAAAACGTGGGACGTTAATCCCAGCTCCGCCTCATTGA 303 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 302 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 246 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||| Sbjct 245 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635110963360