Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1095 412 1e-112 >seq1095 Length=2939 Score = 412 bits (456), Expect = 1e-112 Identities = 431/565 (76%), Gaps = 12/565 (2%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||||||||||||||||||| ||| || ||||| | ||||| || Sbjct 2398 TCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTATGCCTTTGCACTCTACGAATGATTTCC 2339 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| |||||||||||||||||||||||||||||| ||| ||||| | |||||||||| Sbjct 2338 AACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTACACTTTAGGAGG-CGACCGCCCCAG 2280 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| |||||| | ||||||| || ||| | | |||||||| | || Sbjct 2279 TCAAACTGCCCACCTGACACTGTCTCCCGGGTCGATAAGACCCGTAGGTTAGAATTTCAA 2220 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| ||||| | ||||| || || || |||||| |||||| | | ||| | Sbjct 2219 TACAGTCAGGGCGGTATCCCACCAGCGCCTCCACCGAAGCTAGCGCTCCGGTTTCAATGG 2160 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||| |||||||| |||||| | ||| || ||||| || |||| ||| ||| ||| Sbjct 2159 CTCCCGCCTATCCTGTACAAACTGTACCAAAATTCAATATCAGGCTACAGTAAAGCTCCA 2100 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| ||||||| |||| | ||| ||||||| || ||||| |||||||||| Sbjct 2099 CGGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTTCACAGGTACTATAATTTCACCG 2040 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | || |||||||||||| | ||||||| || ||||||| ||||||||||||||| Sbjct 2039 AGTCTCTGGTTGAGACAGTGCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 1980 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1979 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1920 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 | || || || | || ||| || || |||||||||||||||||| Sbjct 1919 AGTTCAGAGCTTCGCTTAC----------GCTAACCCCTCTCCTTAACCTTCCAGCACCG 1870 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||| |||| || ||||| ||| Sbjct 1869 GGCAGGTGTCACCCCCTATACTTCG 1845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702307304320