Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1587 170 4e-40 >seq1587 Length=1365 Score = 170 bits (188), Expect = 4e-40 Identities = 214/293 (73%), Gaps = 8/293 (3%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCA----- 55 ||||||||||||| ||||||||| |||| | | |||||| |||| | ||| Sbjct 1033 GGCTGCTGGCACGTAGTTAGCCGTGGCTTTCTGGTTAGGTACCGTCAAGGTGCCAGCTTA 1092 Query 56 --CACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCC 113 || | | | | || |||||| | || ||| ||||| | ||| | | |||||||| Sbjct 1093 TTCAACTAGCACTTGTTCTTCCCTAACAACAGAGTTTTACGACCCGAA-AGCCTTCATCA 1151 Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173 |||||| | | ||| ||||||| |||||||||| || ||||| |||||||||| Sbjct 1152 CTCACGCGGCGTTGCTCCGTCAGACTTTCGTCCATTGCGGAAGATTCCCTACTGCTGCCT 1211 Query 174 CCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCC 233 ||||||||||| ||| |||||||||||| ||| ||||| || | |||||||| | | Sbjct 1212 CCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGTCGGC 1271 Query 234 TATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGC 286 || |||||| | || |||| ||||||||| | || |||| |||||| |||| Sbjct 1272 TACGCATCGTTGCCTTGGTGAGCCGTTACCTCACCAACTAGCTAATGCGACGC 1324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068741803840