Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1417 140 5e-31 >seq1417 Length=1715 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 807 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 864 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 865 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 924 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 925 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819156788480