Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq4 152 1e-32 >seq4 Length=425142 Score = 152 bits (168), Expect = 1e-32 Identities = 183/249 (73%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 29445 TTGGCAGGATAGTTTTGTGATCGAACTTACACCAGAGGAGAAATACTTTTACCTTTACCT 29504 |||||| ||| || || | || |||||||| ||||| |||||||| ||| | ||| | Sbjct 172237 TTGGCAAGATGCATTCGTTTTAGATCTTACACCGGAGGAAAAATACTTCTACTTATACTT 172296 Query 29505 AATGACAAATAGCAAAACATCACAATGCGGCATTTATGAGTTGCCCaaaaaaaTCATCGA 29564 |||||| ||||||||||| || || | || || |||||| | || | | | || || Sbjct 172297 AATGACTAATAGCAAAACTTCTCAGAGTGGTATCTATGAGCTTCCATTACGAGTGATAGA 172356 Query 29565 AATGGATACAGGATATAACCGCGAAACAGTCGATAAGCTGCTGAAGCGCTTTGTGGACTA 29624 |||||||||||| |||||||| || || || || |||||||| |||| |||| || || Sbjct 172357 AATGGATACAGGGTATAACCGTGAGACGGTTGAGAAGCTGCTAGAGCGTTTTGCTGATTA 172416 Query 29625 CGGAAAAATCAAATACAACGAGGAAACAAAAGAGATCTTCCTTGTGAATTGGATTAAGTA 29684 ||| ||||| | |||||| | | || ||||| || | | | |||||| |||| | Sbjct 172417 CGGGAAAATTTATTACAACAAAAAGACGAAAGAAATTATGTTGCTTAATTGGCTTAAATT 172476 Query 29685 CAATGCGAT 29693 |||||| || Sbjct 172477 CAATGCTAT 172485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130631552899250