Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_009763.3 Length=42973 Score E Sequences producing significant alignments: (Bits) Value seq16 172 2e-38 >seq16 Length=199848 Score = 172 bits (190), Expect = 2e-38 Identities = 283/400 (71%), Gaps = 11/400 (3%) Strand=Plus/Minus Query 430 ATCTTCAGATTGTGTATGTGTACCGATAACGTGAACGTTCTTACCGTTTTTCTCTATTTT 489 |||||||| || ||| || || || ||||||| | | | ||||||| ||||| Sbjct 151901 ATCTTCAGCCTGCAAATGCGTCCCAATCACGTGAATGAAACGATCATTTTTCTTAATTTT 151842 Query 490 TGTATAAACAAAGCCTTTGTTGCTATCA-TTATCGAATCCACAACCGCTTTTGAAAA--C 546 || || ||||| ||||| || | || | ||||| || || || ||||| ||| | Sbjct 151841 CGTGTATACAAATCCTTTATT-CGATAAATTATCTGGCCCGCATCC--TTTTGCAAATAC 151785 Query 547 ATGCTGGATTTTTTCTTTAATAGGATATTTACTTACAATCGCTACGCCACCATCTTCTGC 606 || || || ||||| || || |||| || |||||||| |||||||||||||| | Sbjct 151784 ATATTGAATCTTTTCAGCGATTGGCCATTTGCTCACAATCGCAACGCCACCATCTTCAGG 151725 Query 607 AACAGTTGATGAGTAGCTACCTTCAGTTTTGTCCCA--CCCTG--ATTGAGAACGACCGA 662 | | ||||| ||| | ||| ||||| ||||| | || | | | |||||| | Sbjct 151724 AGTTGAAGATGAATAGTTTCCTAACGTTTTATCCCATTCACTTCCACT-ACTACGACCTA 151666 Query 663 GTACAGGTGTTTGATAAGGATATTCtttttttACATTACTTAATAATTTATCTGATGCGC 722 ||| | |||||||| ||||||||||| || | ||| | |||||| |||||| |||| Sbjct 151665 ATACTGCTGTTTGATTTGGATATTCTTTCTTCAAATTCCCTAATAAACGATCTGAAGCGC 151606 Query 723 CATTATCAAATGCTTCATTGAATATTACGACATCATTATTTTTAATATAAGAAGATTGTC 782 ||||||||| ||||||| ||||| || ||||| | ||| || |||||| | | Sbjct 151605 TATTATCAAACACTTCATTTAATATAACTACATCTTGATTCTTTATATAATCTGCCGCCC 151546 Query 783 CGATTAAATCAGCGCGTTTATATTGCCCCCAGTTTGGATA 822 ||||||||||||| || | | ||| |||||||| ||||| Sbjct 151545 CGATTAAATCAGCACGCTCAGTTTGTCCCCAGTTCGGATA 151506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137383116319150