Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq472 250 2e-61 >seq472 Length=14052 Score = 250 bits (276), Expect = 2e-61 Identities = 427/615 (69%), Gaps = 6/615 (1%) Strand=Plus/Plus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| ||| || ||||| || |||||||| || |||||||||| || || || Sbjct 10454 TCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGA 10513 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||||| ||||||| || ||||| | ||| ||||| || |||| |||||| ||||| Sbjct 10514 ACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAATTCGAAGACGTCGGCGTGCCAC 10573 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || || |||||||| ||||| | || ||| ||| ||||||||||||||||||||| Sbjct 10574 GGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGC 10633 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 ||| |||||| ||||||| | ||| || || | ||||| || | ||| || |||||| Sbjct 10634 GCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTCGTGCCG 10693 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 ||||| ||| || || || || | ||| | ||| ||| ||||||||||| ||| Sbjct 10694 GCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTC 10753 Query 66629 TTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || |||||| ||| | || | | || | | ||||| ||||| || ||| ||| Sbjct 10754 TTGGAGATG--AGCGCGCACGTCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 10811 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || || | ||| | || || ||| || || | || || |||| |||||| | Sbjct 10812 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 10871 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||||| |||||||| | ||||| ||||||| || | ||| | Sbjct 10872 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCT 10931 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865 |||||| | || || || |||| || ||| ||||| || | || ||| || |||||| Sbjct 10932 CAATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATGAGCATGTGTTGCGGGCGTTCG 10990 Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925 | | | | | ||| | | |||||||||||||| || || |||| |||||||| Sbjct 10991 GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGTTCGAGCGTTTTGAAGCCAAAGTAG 11050 Query 66926 GAGTAATTGAAATCG 66940 ||| ||||||| Sbjct 11051 TTGTAGCCGAAATCG 11065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397541617014800