Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= NC_031941.1 Length=34563 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 4e-13 >seq4 Length=425142 Score = 87.8 bits (96), Expect = 4e-13 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 22141 ATCAAGCTCTGCTTGCTCTATCCCTATGTATCTCAGGGTGATTGCAGGTGATGAGTGATT 22200 ||||| ||| |||| | || ||||| || | || || || | || | || ||||| Sbjct 185434 ATCAATCTCATCTTGTTGGATTCCTATATAACGCAATGTAATAGACGGAGCAGAATGATT 185375 Query 22201 GAACATTTTCTGTAATGTTCCTACGTCCTTTGTCTTGTTGTAATATTTATAGCCAAATGT 22260 || || | || | || |||| || |||||||| | |||||| | || ||||| || Sbjct 185374 AAAGATCGTTTGCAGCATTACTACATCTTTTGTCTTCTGGTAATAATGGTATCCAAAAGT 185315 Query 22261 TTTTCGCATTGTATGTGTTCCAACATTATCAATGCCAAGTTCTTCAGCAGCCTCGTGAAT 22320 ||||| | ||||||||||||| | ||||| || | || |||||| || ||| || Sbjct 185314 TTTTCTAAGAGTATGTGTTCCAATTTCATCAAGCCCTACTTTTTCAGCGGCAGCGTTCAT 185255 Query 22321 AATTTGATAGGCT 22333 |||| |||| ||| Sbjct 185254 AATTCGATAAGCT 185242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110472856432250