Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq3929 87.8 2e-15 >seq3929 Length=302 Score = 87.8 bits (96), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 25/193 (13%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 |||||||||||| |||| || ||||||| |||||||||| ||| ||||| ||||| ||| Sbjct 262 ACGGTGGATGCCCAGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGTAAAGCGACG 203 Query 66 GGGATTGGCACATACGAA----TTGATCCGTAGATATCCGAATGGGGCAACCCGAT---- 117 | | | ||| ||| | | |||| ||| ||||||||||| |||||| | Sbjct 202 G---TAAGGTGATATGAACCGCTACAGCCGTCGATGTCCGAATGGGGAAACCCGGTGCAC 146 Query 118 -------AT-ATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTG 167 || |||| || || || |||| ||| | |||||||| ||||||||| Sbjct 145 TCTGTGCATCATTGCAGCATGAATACATAGTGCT----GCAAGGCGAACCGGGGGAACTG 90 Query 168 AAACATCTAAGTA 180 ||||||||||||| Sbjct 89 AAACATCTAAGTA 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476770581589