Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1411 167 3e-39 >seq1411 Length=1429 Score = 167 bits (184), Expect = 3e-39 Identities = 193/255 (76%), Gaps = 10/255 (4%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| |||||||||||||||| |||||||| || |||| | || || |||| Sbjct 349 TTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC-GTGTTTGCACA 291 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC-- 119 | ||||||||||| |||||||| || || || | ||| |||| | | |||| Sbjct 290 GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGGCTTCGGCTCGG 231 Query 120 --AACACGTCGTTC-ACCAGCAGTGGCACC---CCTTCTCCCGAAGTTACGGGGCCATTT 173 | || ||| || ||| | | | || | ||||||||||||||||||| |||||| Sbjct 230 GGAGCAAGTCCCTCCACCTAC-GCGCCAGCGTGCCTTCTCCCGAAGTTACGGCACCATTT 172 Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233 |||| | |||||| ||| ||||| | | | |||||| |||||||||||||||||||||| Sbjct 171 TGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTG 112 Query 234 TGTCGGTTTACGGTA 248 ||||||||| |||| Sbjct 111 TGTCGGTTTGGGGTA 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694357155737