Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq2611 372 9e-101 seq6239 221 4e-55 seq1643 165 2e-38 >seq2611 Length=519 Score = 372 bits (412), Expect = 9e-101 Identities = 289/343 (84%), Gaps = 1/343 (0%) Strand=Plus/Plus Query 155 GACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAA 214 |||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||| Sbjct 4 GACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAA 63 Query 215 CGAGCGCAACCCTTAAGCTTAGTTGCCATC-ATTAAGTTGGGCACTCTAAGTTGACTGCC 273 ||||||||||||||| ||| ||||||| | ||| || ||| |||| ||| ||||||| Sbjct 64 CGAGCGCAACCCTTATCCTTTGTTGCCAGCGATTCGGTCGGGAACTCAAAGGAGACTGCC 123 Query 274 GGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGG 333 ||||| |||||||||||||||||||| |||||||| |||||||| |||||| || | ||| Sbjct 124 GGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAGTAGGG 183 Query 334 CTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATC 393 |||||||||||||||||||| |||||||| | ||||| |||||| ||||| | | Sbjct 184 CTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACC 243 Query 394 CCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATC 453 || ||||| || ||| ||||| | |||||||||||||||| ||||| |||||| Sbjct 244 TCACAAAGTGCGTCGTAGTCCGGATCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATC 303 Query 454 GCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 |||||||||||| |||||| |||| |||||||||||||||||| Sbjct 304 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCG 346 >seq6239 Length=203 Score = 221 bits (244), Expect = 4e-55 Identities = 171/201 (85%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 29 ATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAA 88 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA 60 Query 89 CCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGGGA 148 ||||||| | ||||||||||| | || |||||| | | ||||| ||| | Sbjct 61 CCTTACCTACTCTTGACATCCACGGAATTTGGCAGAGAT-GCCTTAGTGCCTTC-GGGAA 118 Query 149 CAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTC 208 | | | |||||||| ||||||| |||||||||||||||| |||| ||||||||||||||| Sbjct 119 CCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTC 178 Query 209 CCGCAACGAGCGCAACCCTTA 229 ||||||||||||||||||||| Sbjct 179 CCGCAACGAGCGCAACCCTTA 199 >seq1643 Length=1081 Score = 165 bits (182), Expect = 2e-38 Identities = 102/109 (94%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 972 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1031 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC 109 |||||||||||||| |||||||||||||||||||| | ||||||||||| Sbjct 1032 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCC 1080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503904210240