Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq2 338 2e-90 >seq2 Length=722220 Score = 338 bits (374), Expect = 2e-90 Identities = 405/546 (74%), Gaps = 3/546 (1%) Strand=Plus/Minus Query 40 TTTCGAGGCGTTCGCCGAGAAACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGCGCC 99 ||| |||||||| || |||||||| |||||| |||| || || | |||||||| Sbjct 455497 TTTAGAGGCGTTGGCGCTAAAACGGCT-GACGAACGATTGTAAG-TCAGCAATCTGCGCT 455440 Query 100 TTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTA 159 || |||||||||||| || || | ||| | || || | |||||||||| ||||||| || Sbjct 455439 TT-TTTCTTGGCGTTATCGGATAACAGACGTTCACGCGCCTGGGTCGCCGCGGTCATATA 455381 Query 160 CTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGT 219 ||||| || || || | | | ||||||||||| || |||| ||||||||||| || Sbjct 455380 TTCGTCATAATTACCGGAATAAACCCGCAGCTCGCCATAATCCAAATCAGCCATGTGCGT 455321 Query 220 ACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTG 279 ||| || | || |||||||||||||| || || ||||| ||||| |||| ||||| Sbjct 455320 ACAGACCATATTAAGGAAGTGACGGTCATGCGAAATGATAATCATGGTGCTGTCACGCTC 455261 Query 280 GGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTC 339 | |||| | | ||||||||||| || || | |||||||| || ||| |||||||| || Sbjct 455260 GTTCAGCACCTGCTCCAGCCAGCGAATAGTATCGATGTCCAGGTTGTTCGTCGGTTCATC 455201 Query 340 GAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCA 399 ||| ||||| | || |||| |||||||||||||| ||||||| ||||| | || | Sbjct 455200 GAGTAACAGAATATCGGGATTAGAAAACAGCGCCTGCGCCAGCAGCACACGTAATTTAAA 455141 Query 400 GCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAG 459 |||||| | | |||||||||||| || | |||||||| | |||||| || | || || Sbjct 455140 GCCCGGCGCAATTTCGCTCATCGGGCCATAATGCTGCTCAACCGGAATGCCGACGCCGAG 455081 Query 460 CAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTC 519 | | |||||||||||| || || ||| | |||||||||||||| || | | || Sbjct 455080 TAATAACTCACCGGCACGAGACTCCGCGCTATAGCCGTCCATCTCACCGTAAAGTGCCTC 455021 Query 520 CAGCTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATC 579 || ||| | || || ||||||||||||||||| |||| || ||||||| || Sbjct 455020 AAGATCGCCGACTTTATACCCCTCTTCTTCGCTCATTTCTGGCAAAGAATAAATACGGTC 454961 Query 580 ACGCTC 585 ||||| Sbjct 454960 GCGCTC 454955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881476415924