Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1848 360 7e-97 >seq1848 Length=887 Score = 360 bits (398), Expect = 7e-97 Identities = 412/543 (76%), Gaps = 18/543 (3%) Strand=Plus/Plus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTG-GGCCCCCTAGACCATCCAGTGC 110 ||| ||||| |||||| | | ||||||| | |||||||||| | | |||||| Sbjct 248 CGGTATTCGCAGTTTGCATCGGGTTGGTAAGCCGGGATGGCCCCCTAGCCGAAACAGTGC 307 Query 111 TCTACCTCCGG-GAAGAAA-CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168 |||||| ||| || || |||| | |||| |||||||| |||||||||||||||| Sbjct 308 TCTACCCCCGAAGATGAGTTCACGAGGCGCT--ACCTAAATAGCTTTCGGGGAGAACCAG 365 Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228 ||||| | ||||||||||||||||||||| | ||||||||||||| || | ||||||| Sbjct 366 CTATCTCCCGGTTTGATTGGCCTTTCACCCCCAGCCACAGGTCATCCGCTAATTTTTCAA 425 Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288 | | ||| |||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct 426 CATTAGTCGGTTCGGTCCTCCAGTTAGTGTTACCCAACCTTCAACCTGCCCATGGCTAGA 485 Query 289 TCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCT 348 |||| | ||||||||| | | ||| ||| | |||||| || |||||| |||| || Sbjct 486 TCACCGGGTTTCGGGTCTATACCCTGCAACTTA-ACGCCCAGTTAAGACTCGGTTTCCCT 544 Query 349 ACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCA 408 ||||| ||| | || ||||||||| || ||| || || |||| | | |||| | || Sbjct 545 GCGGCTCCCCTATAC-GGTTAACCTTGCTACAGAA-TATAAGTCGCTGACCCATTATACA 602 Query 409 AAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACA 468 ||||| |||| |||||| || | || | | ||||| || | ||||| | ||| Sbjct 603 AAAGGTACGCAGTCACC-----CCCATAAAGAA----GGCTCCCACTGCTTGTACGTACA 653 Query 469 TGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTA 527 |||||||||| || ||||||||||| | | ||||| |||||| |||||||||||||||| Sbjct 654 CGGTTTCAGGTTCTGTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 713 Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 || || | |||||||||| |||||||||||| ||| || ||||||| ||| ||||| Sbjct 714 CTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCA 773 Query 588 CAC 590 || Sbjct 774 GAC 776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817484237056