Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq13 141 2e-31 >seq13 Length=199142 Score = 141 bits (156), Expect = 2e-31 Identities = 276/415 (67%), Gaps = 0/415 (0%) Strand=Plus/Plus Query 6 TTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCTGGTCC 65 ||||| ||||| || | | || || || |||||||||| ||||| | || | ||| Sbjct 64558 TTCGGACTCTGAAACGCCAGATCGTAAATCTGGAAGCCCAGATGCATAAATTTGCGATCC 64617 Query 66 AGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNNNNNNN 125 || ||||| || || | | |||| || ||||| |||| ||| || || Sbjct 64618 AGATGCAGATAAGGAAACACCGCGTCGACGGGCAGTTCCGGCACCATTTTTACCACGCCA 64677 Query 126 NNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGCCGGTC 185 ||| |||||| || || || ||||| || || |||| ||||||| Sbjct 64678 ACCAGCATCAGCGGCGCGGTTTCACCAGCGGCACGCGCCACCGCCAGAATCAGGCCGGTC 64737 Query 186 GTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGGTCGCG 245 |||||| || ||||| |||| || | |||||||| || || |||| |||||| Sbjct 64738 AGCATGGCAGGCACCGCCATCGGCAGCACCACGTTCCACAGGGTTTCCGCCTGAGTCGCG 64797 Query 246 CCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTTCGGTG 305 |||| |||||||| |||| |||| | | ||||| || | | || |||||||| Sbjct 64798 CCCAGCGCCAGCGACCCCTGCCGCAGGCTGTTGGGAATGCGGGATAGTCCCTCTTCGGTC 64857 Query 306 GCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCAGGTCC 365 ||||| ||||||||||| | | || | ||||| |||| ||| |||||||||| | Sbjct 64858 GCCACAATCACCACCGGCAGCGTTAGTAACGCCAGAGTCAGCGACGCCCACAGCAAACCA 64917 Query 366 GGGGTACCCAAGGTCGGCGCCGGCAGTGCTTCGGGGAAGACCAAGCGGTCTATCG 420 || || || ||||| || ||||| || || ||||| | ||||||||| Sbjct 64918 GGTGTCCCGAAGGTGGGATTGGGCAGCGCGCTGGCGAAGAAGAGCTGGTCTATCG 64972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241520922496