Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20lychnidis-
dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq1411 266 5e-69
>seq1411
Length=1429
Score = 266 bits (294), Expect = 5e-69
Identities = 218/265 (82%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70
|||| |||||||||| |||||| |||||| |||| |||||||| || || |||| |
Sbjct 1262 TTCGTGCTTAGATGCTTTCAGCACTTATCTTTTCCGCACTTAGCTACCGGGCAATGCCAT 1203
Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130
||||| ||||| | |||||| ||| || || ||||||||||||||||| | ||
Sbjct 1202 TGGCATGACAACCCGAACACCAGTGGTGCGTTCACTCCGGTCCTCTCGTACTAGGAGCAA 1143
Query 131 CTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190
| || ||||| | ||| |||||||| | |||||||||||||||||||| |||||||||
Sbjct 1142 CCCCCCTCAATTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTA 1083
Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250
|||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||
Sbjct 1082 AACCCAGCTCGCGTACCACTTTAAACGGCGAACAGCCGTACCCTTGGGACCTACTTCAGC 1023
Query 251 CCCAGGATGAGACGAGCCGACATCG 275
||||||||| || ||||||||||||
Sbjct 1022 CCCAGGATGTGATGAGCCGACATCG 998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780751824884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |