Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq4 129 2e-27 >seq4 Length=447486 Score = 129 bits (142), Expect = 2e-27 Identities = 290/430 (67%), Gaps = 12/430 (3%) Strand=Plus/Minus Query 16 TTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCACCGGTCTAGTT 75 ||| |||| ||||| || | ||| | | |||| | |||||||| | | | || | | | Sbjct 200377 TTCTGGTCCTTCCGCGTGATGGTGGCGCTGGGCCTGCTGATGAT-TACGCTGGGCGTGGT 200319 Query 76 CAGCCAGTGGCTAGCGCCG----GGGCGACAAGATGTACACGTCCAAGCCGTTCCTGTAC 131 ||||| |||||| ||| ||||| | ||| ||| || ||||||| Sbjct 200318 CAGCCTGTGGCT-GCGTTTCAAAGGGCGTCTCTATGA----GTCGCGTCCTTTCCTGTGG 200264 Query 132 CTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACG 191 | ||| | | |||||| ||||| || |||| |||||||| || |||||||| ||||| Sbjct 200263 TTTGCGCTATTGATGGGGCCGTCGGGTCTGATTGCGATTCTGGCAGGCTGGTTTACCACT 200204 Query 192 GAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATGCGTCCTCC 251 |||||||| |||||||||||||||||||| ||| || ||||||| |||||| ||| Sbjct 200203 GAAATCGGTCGTCAGCCGTGGGTGGTCTATGGCGTGCAGCGCACGATTGATGCGGTCTCG 200144 Query 252 GGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCG 311 | ||| | |||| |||| || | ||| || || | |||| ||| | || Sbjct 200143 GCACATGGGGATATGCACATGAGCATCAGCCTGCTGGCCTTTATTCTGGTCTACAGCTCG 200084 Query 312 CTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGCAGACCCAC 371 ||||||| | || |||||||||||| ||| | | || ||| ||| | Sbjct 200083 GTGTTCGGCGTGGGGTATCACTACATGATGCGTCTGATTAAGCAGGGACCGGTTACCGGC 200024 Query 372 GAAGGCGAT-GAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCCGTCCGTT 430 |||||| || |||| | ||||||||||| ||||| || || || |||||| | Sbjct 200023 GAAGGCCATATCACCGA-AGAGGGTGGTCCTGGTCAGAAGAAAACCCCGGCGCGTCCGCT 199965 Query 431 GTCTGCCGCC 440 || || ||| Sbjct 199964 TTCCGCTGCC 199955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724690147488