Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2907 293 4e-77 seq6114 122 2e-25 seq6082 122 2e-25 seq1057 122 2e-25 >seq2907 Length=452 Score = 293 bits (324), Expect = 4e-77 Identities = 188/204 (92%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 449 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 390 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 | ||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||| Sbjct 389 TTTTCACCTTGGCCGGAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGATGGGGATAGA 330 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||||||| ||||||||||||||| ||||||||||| | ||||||| |||| Sbjct 329 ACATTGCAATTATTGTTCTTCAACGAGGAATACCTAGTAAGCGTGATTCATCAGATCGCG 270 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 269 TTGATTACGTCCCTGCCCTTTGTA 246 >seq6114 Length=206 Score = 122 bits (134), Expect = 2e-25 Identities = 75/79 (95%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 79 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 20 Query 185 TCATCACCTTGGCCGGAAG 203 | |||||||||||||||| Sbjct 19 TTTTCACCTTGGCCGGAAG 1 >seq6082 Length=207 Score = 122 bits (134), Expect = 2e-25 Identities = 75/79 (95%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 129 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 188 Query 185 TCATCACCTTGGCCGGAAG 203 | |||||||||||||||| Sbjct 189 TTTTCACCTTGGCCGGAAG 207 >seq1057 Length=2657 Score = 122 bits (134), Expect = 2e-25 Identities = 92/107 (86%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| | ||| |||||||| || || | |||||||| Sbjct 2132 GAACGAGACCTTAACCTGCTAAATAGTCCCGCCGGCTTTGGCTGGCGGCTGACTTCTTAG 2191 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||| || | ||| |||||||||||||||||||||||||| Sbjct 2192 AGGGACTATCAGCGTTTAGCTGATGGAAGTTTGAGGCAATAACAGGT 2238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947139672832