Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3929 163 5e-38 >seq3929 Length=302 Score = 163 bits (180), Expect = 5e-38 Identities = 188/250 (75%), Gaps = 6/250 (2%) Strand=Plus/Minus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| |||||||||| ||| | | |||||||||||||||| || |||| |||| Sbjct 264 ACACGGTGGATGCCCAGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGTAAAGCGA 205 Query 66 CGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG----C 120 ||| || ||| | | || | ||| ||| ||||||||||||||||||| | Sbjct 204 CGGTAAGGTGATATGAACCGCTAC-AGCCGTCGATGTCCGAATGGGGAAACCCGGTGCAC 146 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 || || |||||||| ||||||||||| ||||| |||||| || |||||||||| Sbjct 145 TCTGTGCATCATTGCAGCATGAATACATAGTGCTGCAAGGCGAACCGGGGGAACTGAAAC 86 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 ||||||||| | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct 85 ATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACG 26 Query 241 GGGATGAGCC 250 |||| |||| Sbjct 25 GGGAGCAGCC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918341507104