Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1056 426 5e-117 seq1430 369 1e-99 >seq1056 Length=2662 Score = 426 bits (472), Expect = 5e-117 Identities = 242/246 (98%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 2449 AGGGTCTTCTTTCCCCGCTTATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 2390 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2389 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 2330 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2329 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 2270 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2269 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCAC 2210 Query 538 TTTCTG 543 |||||| Sbjct 2209 TTTCTG 2204 >seq1430 Length=1388 Score = 369 bits (408), Expect = 1e-99 Identities = 259/292 (89%), Gaps = 5/292 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 906 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATT 965 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 966 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1025 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| |||| || ||| || || |||| ||||| ||||||| Sbjct 1026 AGCCCGCGAAGGACCTTAATGCCAAAACGTGGGACGTTAATCCCAGCTCCGCCTCATTGA 1085 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 1086 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 1142 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||| Sbjct 1143 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAAC 1193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635095854112