Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1411 325 1e-86 >seq1411 Length=1429 Score = 325 bits (360), Expect = 1e-86 Identities = 412/556 (74%), Gaps = 18/556 (3%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 |||||||||||||| ||| ||| || |||| ||| | ||| || ||| | | || Sbjct 851 TCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAG 792 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 ||||| | || |||||||||| ||| ||||| | |||||||||| |||||||||| Sbjct 791 CTGACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAGTCAAACTACCCA 733 Query 133 CCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGAT-ATCCACTACGGTCA-GA 190 |||| |||||||| || ||| ||| | ||||| | |||||| ||| | || | | | Sbjct 732 CCAGACACTGTCCGCAGCCCGGATTACGGGCCTACGTTAGAACATCAA--ACATTAAAGG 675 Query 191 GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTA 250 |||||||||||| | |||||| ||| |||| ||| ||| || |||||||||| Sbjct 674 GTGGTATTTCAAGGTTGGCTCCACGCAGACTGGCGTCCGCGCTTCAAAGCCTCCCACCTA 615 Query 251 TCCTACACAA-ACCGCACCGAATGC-CAATACCAAGCTATAGTGAAGGTCC-CGGGGTCT 307 ||||||||| | || | |||| || | |||||| |||| ||||| | |||||||| Sbjct 614 TCCTACACATCAAGGCTC--AATGTTCAGTGTCAAGCTGTAGTAAAGGTTCACGGGGTCT 557 Query 308 TTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTG 367 || |||| ||||||| | | ||||||| || | | ||||||||| | | || | Sbjct 556 TTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGG 497 Query 368 GTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGA 427 || |||||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct 496 GTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGA 437 Query 428 ATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCC 487 ||||||||||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct 436 ATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGA 377 Query 488 GCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCG 547 || || | | || | | || | |||||||||| |||||||||||||| Sbjct 376 GCTTCTC------CTTG--CGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCG 325 Query 548 TCAGTCCGTATACCTC 563 ||| |||||||| || Sbjct 324 TCACACCGTATACGTC 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702291574144