Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq4 315 2e-81 >seq4 Length=447486 Score = 315 bits (348), Expect = 2e-81 Identities = 519/745 (70%), Gaps = 14/745 (2%) Strand=Plus/Minus Query 37702 AAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAA 37761 ||||| ||||| || ||| ||| ||||| || | || || | |||| | || ||||| Sbjct 112189 AAAAGCTGACCGTACCGGCACCGGTACGCTTTCAATTTTTGGTCACCAGATGCGTTTCAA 112130 Query 37762 CTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTA 37821 | || ||||| |||||||| || || || || |||| ||||||||||| || ||| | Sbjct 112129 TCTGCAGGATGGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCGATTATTCA 112070 Query 37822 TGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGT 37881 ||| ||||| |||||| | ||||||||||| ||| || | ||| | | || || ||| Sbjct 112069 TGAGCTGCTGTGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAAAACAACGT 112010 Query 37882 GACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCA 37941 | || ||||||||||||||||| || || ||||||||||||||| | || ||| || Sbjct 112009 CTCCATCTGGGATGAGTGGGCGGATGAGAATGGCGATCTCGGCCCGGTGTATGGCAAACA 111950 Query 37942 ATGGCGCTCGTGG--AAGGG--AGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTG 37997 |||||| ||| || || ||| | | ||| | | |||||| | ||| Sbjct 111949 GTGGCGCAGCTGGGGAACGGCCAGCGGCCAGGAGA----TTGACCAGTTAAGCCAGGTGA 111894 Query 37998 TCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAG 38057 | || || | || || |||| | ||||||||| | | || || ||||| || | Sbjct 111893 TGGAGCAGCTGAAGCGCGATCCCGACTCACGCCGGATTATCGTTTCTGCCTGGAACGTCG 111834 Query 38058 CAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCG 38114 || || ||||||| |||| | || || || ||| ||| |||||||| || | Sbjct 111833 GCGAGCTGAGCGAGATGGCGCTGGCTCCTTGCCA---CGCGTTCTTCCAGTTCTACGTGG 111777 Query 38115 CCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGC 38174 | ||||| | || ||| | | |||||||| || | || | || ||| Sbjct 111776 CGGACGGCAAACTCTCCTGCCAGCTCTATCAGCGCTCGTGCGACATCTTCCTGGGCCTGC 111717 Query 38175 CGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGG 38234 ||||||||||||| ||||| ||| || || |||||||| || || || ||||| || Sbjct 111716 CGTTTAACATCGCCAGCTATGCGTTGCTGGTACATATGGTGGCGCAGCAGTGCGATCTGC 111657 Query 38235 ATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAAC 38294 | || || || || | | |||||||| || ||| | |||| || |||||||| | Sbjct 111656 AGGTGGGCGACTTCGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGC 111597 Query 38295 AAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGA 38354 | ||| ||||||||||| ||||| ||||| |||||||| ||||| | ||||| | Sbjct 111596 AGGCGCGCCTGCAGCTGACCCGCGAACCGCGTCCGCTGCCATCACTTGTTATCAAACGCA 111537 Query 38355 AGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGC 38414 | ||| |||| | ||||||||| | | ||| || ||||| || | ||||||||||||| Sbjct 111536 AACCGGCGTCGCTGTTTGACTATCAGTTCGAAGATTTTGAGATTGAAGGCTACGATCCGC 111477 Query 38415 ATCCGGCGATTAAAGCACCGGTGGC 38439 |||| ||||| ||||| || || || Sbjct 111476 ATCCCGCGATCAAAGCCCCTGTCGC 111452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130630119451850