Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq4 203 1e-47 >seq4 Length=447486 Score = 203 bits (224), Expect = 1e-47 Identities = 303/425 (71%), Gaps = 14/425 (3%) Strand=Plus/Minus Query 2495 ACTACCTTGAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGATGGTATGGACG 2554 ||| ||| ||||| || ||| | || || ||| | ||||||||||||| |||||| Sbjct 62096 ACTTCCTGGAAGATCTGACTAAACAGTATCCGATCGTTTCTATCGAAGATGGCCTGGACG 62037 Query 2555 AAAACGACTGGGACGGTTGGAAATCTCTTACTGAAC----GT-CTTGGTGGTAAAGTTCA 2609 || ||||||||||| | || ||||| || || || || | ||| | || Sbjct 62036 AATCTGACTGGGACGGCT-----TCGCTTACCAGACCAAAGTACTGGGCGACAAAATCCA 61982 Query 2610 ATTGGTTGGTGACGACTTCTTCGTAACTAACACTGCTTACCT-TGAAA-AAGGTATTGCA 2667 |||| ||||| ||| | ||||| || ||||| | | | ||||| ||||||| | Sbjct 61981 GCTGGTGGGTGATGACCTGTTCGTTACCAACAC--CAAAATTCTGAAAGAAGGTATCGAT 61924 Query 2668 GAACACGCTGCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACT 2727 || |||||||| || || |||||| | ||||| |||||| || |||| |||||| Sbjct 61923 AAAGGTATCGCTAACTCCATTCTGATCAAATTCAACCAGATCGGTTCTCTGACCGAAACT 61864 Query 2728 TTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCA 2787 | | || ||| ||||||||||||| || || ||||| || || | || ||||||||| Sbjct 61863 CTGGCTGCGATCAAAATGGCGAAAGACGCGGGCTACACTGCCGTGATCTCTCACCGTTCA 61804 Query 2788 GGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATT 2847 || ||||| |||||| | || |||||||| | || || | ||| || || || || Sbjct 61803 GGCGAAACCGAAGATGCGACCATCGCTGACCTGGCGGTAGGTACTGCAGCGGGCCAGATC 61744 Query 2848 AAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATC 2907 || || |||||| || ||| |||||||| ||||||| |||||||| || | |||||| Sbjct 61743 AAAACCGGTTCAATGAGCCGTTCTGACCGTGTTGCTAAGTACAACCAGCTGATCCGTATC 61684 Query 2908 GAAGA 2912 ||||| Sbjct 61683 GAAGA 61679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156026598523236