Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031264.1 Length=46877 Score E Sequences producing significant alignments: (Bits) Value seq174 120 9e-23 >seq174 Length=42168 Score = 120 bits (132), Expect = 9e-23 Identities = 214/308 (69%), Gaps = 11/308 (4%) Strand=Plus/Minus Query 3594 TGAGAACACTATCACCATCCTTGACGTTATCGGTGAAGATTACTGGTCTGGAGGTGGCGT 3653 ||| |||| |||||||| |||| ||||||||||| || ||||| || | || || Sbjct 18929 TGAAAACAGCATCACCATTTTTGATGTTATCGGTGAGGA---CTGGTGGGGTGACGGTGT 18873 Query 3654 TACGTCGAAACGGGTTGCAGCGGCGCTTCGGGCTAT---CGGCAACAATGAAATCTTTGT 3710 | | | || |||| | | |||||| | | ||| || ||| || ||| Sbjct 18872 AAGCGCCAGCCGCATTGCTGGCGTGCTTCGTTCACTGAACGGGGACGATG---TCACTGT 18816 Query 3711 CGATATCAACTCTCCGGGCGGGGACTTCTTTGAAGGTGTGGCGATCTACAATCTGCTGCG 3770 |||||||||| || ||||| || | ||||| || || ||||||||||| || || || Sbjct 18815 TTATATCAACTCCCCTGGCGGCGATATGTTTGAGGGAGTTGCGATCTACAACCTTCTTCG 18756 Query 3771 CGCGCACC-CGGCGAAAGTCACAGTGCGCATTCTCGGCATGGCCGCTTCTGCCGCATCTG 3829 | | || |||| || || || || ||||||||| |||| |||||||| || || | Sbjct 18755 TGAGTACAGCGGC-AAGGTGACGGTAAAAATTCTCGGCCTGGCTGCTTCTGCGGCGTCAG 18697 Query 3830 TTATCGCTATGGCCGGTGATGAAGTCCTGATCGGCAAGGCAGGCTTCATTATGGTGCACA 3889 | || || ||||||||||||||| | | |||||| | | |||| | ||| | |||| Sbjct 18696 TAATTGCGATGGCCGGTGATGAAATTCAGATCGGGCGTGGTGCCTTCCTGATGATTCACA 18637 Query 3890 ACGCTTGG 3897 |||| ||| Sbjct 18636 ACGCCTGG 18629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149873463931542