Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq3 152 1e-32 >seq3 Length=630259 Score = 152 bits (168), Expect = 1e-32 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 33660 CCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTC 33719 |||||| | ||||||| ||| ||||| | ||| || || || ||||| | || || || Sbjct 51076 CCATTTACGGGTGCGCAGCTGGCCTTCGATATAGACCTGCGATCCTTTTTTCAGGTATTC 51017 Query 33720 ACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTT 33779 ||| || | |||||| || |||||||| | || || |||||||| ||||| ||| || Sbjct 51016 ACCCGCGACTTCAGCCAGTTTGCCAAACAGCACCACACGGTGCCACTCAGTGATCTCTTT 50957 Query 33780 TTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAAC 33839 || ||||| || ||| || ||| |||||| ||||| | | | ||||||||| Sbjct 50956 GTTTTCACCGGTCTGCTTGTCGCGCCAGCTTTCCGACGTAGCCAGCGTAATGTTGGCAAC 50897 Query 33840 AGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGAT 33899 |||||| ||||||||||| || || ||||| || ||||| || | | |||| | || Sbjct 50896 AGCGCCACCATTTGGCATATAACGTACTTCCGGATCCTGACCCAGATTCCCGACAAGAAT 50837 Query 33900 TACTTTATTTACGCCGCGAGTTGCCAT 33926 ||||| || ||||| ||| | ||||| Sbjct 50836 CACTTTGTTAACGCCACGACTGGCCAT 50810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144961835435312