Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010705.1_202016-07-08] 5,029 sequences; 28,124,222 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1138 214 2e-53 seq1796 73.4 4e-11 >seq1138 Length=2193 Score = 214 bits (236), Expect = 2e-53 Identities = 159/185 (86%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||| Sbjct 1080 AACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACA 1139 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || || Sbjct 1140 TTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-CC 1198 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | |||||| | |||| ||||||||||||| Sbjct 1199 GTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTT 1258 Query 183 GGATT 187 ||||| Sbjct 1259 GGATT 1263 >seq1796 Length=864 Score = 73.4 bits (80), Expect = 4e-11 Identities = 65/80 (81%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 108 TTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTC 167 ||||| || |||| |||||||| |||| ||||||| ||||| | |||||| | ||| Sbjct 482 TTTCTGAGATCGCC-GTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTC 540 Query 168 AAAGGTGAAATTCTTGGATT 187 | |||||||||||||||||| Sbjct 541 AGAGGTGAAATTCTTGGATT 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511975056160