Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010715.1_202016-07-08] 5,717 sequences; 25,920,840 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq669 237 2e-60 >seq669 Length=6269 Score = 237 bits (262), Expect = 2e-60 Identities = 180/207 (87%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||| || ||||| || ||||||||||| ||| | Sbjct 2906 GTACAAAGGGCAGGGACGTAATCAACGCGATCT-GATGAATCACGCTTACTAGGTATT-C 2849 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| | ||||| |||||| Sbjct 2848 CTCGTTGAAGAACAATAATTGCAATGTTCTATCCCCATCACGACAGAGTTTCACAAGATT 2789 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||| ||| |||||||||||| | ||||| || | |||||||||||||||||| Sbjct 2788 ACCCGGGCCTTCCGGCCAAGGTGAAAATACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGC 2729 Query 179 GGCCCAGAACATCTAAGGGCATCACAG 205 ||||||||||||||||||||||||||| Sbjct 2728 GGCCCAGAACATCTAAGGGCATCACAG 2702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751958351655