Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010715.1_202016-07-08] 5,717 sequences; 25,920,840 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq338 116 9e-24 seq1666 82.4 2e-13 >seq338 Length=19627 Score = 116 bits (128), Expect = 9e-24 Identities = 160/221 (72%), Gaps = 12/221 (5%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||||| ||||||||||||| |||||||||| | ||| | || ||||| ||| Sbjct 16468 TAAGTTGCTGACCCATTATGCAAAAGGTACAATATTACCAATTAA----GGCTCTATCTG 16523 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 ||| || | | | |||||| ||| |||||| | || || | ||||| |||| Sbjct 16524 CTTATAAGATTGCTAATTCAGGCTCTGTTTCAC--CAGTCATCGACTTGCTTTTAACCTT 16581 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| |||||||||| | | | || |||||||||||||||||| Sbjct 16582 TCCCTCACGGTACTC-TTCACTATCGCTAAACATATCATACTTAGCCTTGGAGGATGGTA 16640 Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||||||||||||| | || || |||||| ||||| Sbjct 16641 CCCCCATATTCAGACAGACTTACT-----TCCGTCTTACTC 16676 >seq1666 Length=943 Score = 82.4 bits (90), Expect = 2e-13 Identities = 80/102 (78%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377 ||||||||||||||| |||||||||| | | | || |||||||||||||||||| Sbjct 198 TTCCCTCACGGTACTC-TTCACTATCGCTAAACATATCATACTTAGCCTTGGAGGATGGT 256 Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||||||||||||| | || || |||||| ||||| Sbjct 257 ACCCCCATATTCAGACAGACTTACT-----TCCGTCTTACTC 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241529017728