Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011025.1_202016-07-08] 4,724 sequences; 26,244,534 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4124 271 1e-70 >seq4124 Length=2866 Score = 271 bits (300), Expect = 1e-70 Identities = 179/198 (90%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 1949 ACCTGTTATTGCCTCAAACTTCCATCAGCTAAACGCTGATAGTCCCTCTAAGAAGTCAGC 1890 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| ||| || || ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1889 CGCCAGCCAAAGCCGGCGGGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 1830 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 1829 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAGATCAAGA 1770 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 1769 AAGAGCTATCAATCTGTC 1752 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2474 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796763535444