Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011025.1_202016-07-08] 4,724 sequences; 26,244,534 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4124 214 2e-53 seq2186 73.4 4e-11 >seq4124 Length=2866 Score = 214 bits (236), Expect = 2e-53 Identities = 159/185 (86%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||| Sbjct 1255 AACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACA 1314 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || || Sbjct 1315 TTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-CC 1373 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | |||||| | |||| ||||||||||||| Sbjct 1374 GTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTT 1433 Query 183 GGATT 187 ||||| Sbjct 1434 GGATT 1438 >seq2186 Length=864 Score = 73.4 bits (80), Expect = 4e-11 Identities = 65/80 (81%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 108 TTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTC 167 ||||| || |||| |||||||| |||| ||||||| ||||| | |||||| | ||| Sbjct 482 TTTCTGAGATCGCC-GTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTC 540 Query 168 AAAGGTGAAATTCTTGGATT 187 | |||||||||||||||||| Sbjct 541 AGAGGTGAAATTCTTGGATT 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511976568960