Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011195.1_202016-07-08] 4,858 sequences; 26,275,703 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1318 293 4e-77 >seq1318 Length=3150 Score = 293 bits (324), Expect = 4e-77 Identities = 188/204 (92%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 449 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 390 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 | ||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||| Sbjct 389 TTTTCACCTTGGCCGGAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGATGGGGATAGA 330 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||||||| ||||||||||||||| ||||||||||| | ||||||| |||| Sbjct 329 ACATTGCAATTATTGTTCTTCAACGAGGAATACCTAGTAAGCGTGATTCATCAGATCGCG 270 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 269 TTGATTACGTCCCTGCCCTTTGTA 246 Score = 122 bits (134), Expect = 2e-25 Identities = 92/107 (86%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| | ||| |||||||| || || | |||||||| Sbjct 1019 GAACGAGACCTTAACCTGCTAAATAGTCCCGCCGGCTTTGGCTGGCGGCTGACTTCTTAG 960 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||| || | ||| |||||||||||||||||||||||||| Sbjct 959 AGGGACTATCAGCGTTTAGCTGATGGAAGTTTGAGGCAATAACAGGT 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947153985024