Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011195.1_202016-07-08] 4,858 sequences; 26,275,703 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1215 134 2e-29 >seq1215 Length=1802 Score = 134 bits (148), Expect = 2e-29 Identities = 141/176 (80%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| ||||||||||| || | |||| | Sbjct 807 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTTCGATCGGGCAAT 864 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 865 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 924 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 925 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819161446912