Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2694 237 2e-60 seq132 91.5 2e-16 seq126 91.5 2e-16 >seq2694 Length=453 Score = 237 bits (262), Expect = 2e-60 Identities = 180/207 (87%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||| || ||||| || ||||||||||| ||| | Sbjct 208 GTACAAAGGGCAGGGACGTAATCAACGCGATCT-GATGAATCACGCTTACTAGGTATT-C 151 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| | ||||| |||||| Sbjct 150 CTCGTTGAAGAACAATAATTGCAATGTTCTATCCCCATCACGACAGAGTTTCACAAGATT 91 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||| ||| |||||||||||| | ||||| || | |||||||||||||||||| Sbjct 90 ACCCGGGCCTTCCGGCCAAGGTGAAAATACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGC 31 Query 179 GGCCCAGAACATCTAAGGGCATCACAG 205 ||||||||||||||||||||||||||| Sbjct 30 GGCCCAGAACATCTAAGGGCATCACAG 4 >seq132 Length=207 Score = 91.5 bits (100), Expect = 2e-16 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 132 CGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 |||||||||||| | ||||| || | |||||||||||||||||||||||||||||| Sbjct 5 CGGCCAAGGTGAAAATACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACAT 64 Query 191 CTAAGGGCATCACAG 205 ||||||||||||||| Sbjct 65 CTAAGGGCATCACAG 79 >seq126 Length=206 Score = 91.5 bits (100), Expect = 2e-16 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 132 CGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 |||||||||||| | ||||| || | |||||||||||||||||||||||||||||| Sbjct 5 CGGCCAAGGTGAAAATACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACAT 64 Query 191 CTAAGGGCATCACAG 205 ||||||||||||||| Sbjct 65 CTAAGGGCATCACAG 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751965155845