Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2694 293 4e-77 seq3045 122 2e-25 seq132 122 2e-25 seq126 122 2e-25 >seq2694 Length=453 Score = 293 bits (324), Expect = 4e-77 Identities = 188/204 (92%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 4 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 63 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 | ||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||| Sbjct 64 TTTTCACCTTGGCCGGAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGATGGGGATAGA 123 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||||||| ||||||||||||||| ||||||||||| | ||||||| |||| Sbjct 124 ACATTGCAATTATTGTTCTTCAACGAGGAATACCTAGTAAGCGTGATTCATCAGATCGCG 183 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 184 TTGATTACGTCCCTGCCCTTTGTA 207 >seq3045 Length=688 Score = 122 bits (134), Expect = 2e-25 Identities = 92/107 (86%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| | ||| |||||||| || || | |||||||| Sbjct 163 GAACGAGACCTTAACCTGCTAAATAGTCCCGCCGGCTTTGGCTGGCGGCTGACTTCTTAG 222 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||| || | ||| |||||||||||||||||||||||||| Sbjct 223 AGGGACTATCAGCGTTTAGCTGATGGAAGTTTGAGGCAATAACAGGT 269 >seq132 Length=207 Score = 122 bits (134), Expect = 2e-25 Identities = 75/79 (95%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 79 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 20 Query 185 TCATCACCTTGGCCGGAAG 203 | |||||||||||||||| Sbjct 19 TTTTCACCTTGGCCGGAAG 1 >seq126 Length=206 Score = 122 bits (134), Expect = 2e-25 Identities = 75/79 (95%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 79 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 20 Query 185 TCATCACCTTGGCCGGAAG 203 | |||||||||||||||| Sbjct 19 TTTTCACCTTGGCCGGAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947154695424