Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1434 250 2e-61 >seq1434 Length=16524 Score = 250 bits (276), Expect = 2e-61 Identities = 427/615 (69%), Gaps = 6/615 (1%) Strand=Plus/Minus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| ||| || ||||| || |||||||| || |||||||||| || || || Sbjct 5760 TCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGA 5701 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||||| ||||||| || ||||| | ||| ||||| || |||| |||||| ||||| Sbjct 5700 ACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAATTCGAAGACGTCGGCGTGCCAC 5641 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || || |||||||| ||||| | || ||| ||| ||||||||||||||||||||| Sbjct 5640 GGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGC 5581 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 ||| |||||| ||||||| | ||| || || | ||||| || | ||| || |||||| Sbjct 5580 GCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTCGTGCCG 5521 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 ||||| ||| || || || || | ||| | ||| ||| ||||||||||| ||| Sbjct 5520 GCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTC 5461 Query 66629 TTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || |||||| ||| | || | | || | | ||||| ||||| || ||| ||| Sbjct 5460 TTGGAGATG--AGCGCGCACGTCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 5403 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || || | ||| | || || ||| || || | || || |||| |||||| | Sbjct 5402 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 5343 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||||| |||||||| | ||||| ||||||| || | ||| | Sbjct 5342 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCT 5283 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865 |||||| | || || || |||| || ||| ||||| || | || ||| || |||||| Sbjct 5282 CAATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATGAGCATGTGTTGCGGGCGTTCG 5224 Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925 | | | | | ||| | | |||||||||||||| || || |||| |||||||| Sbjct 5223 GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGTTCGAGCGTTTTGAAGCCAAAGTAG 5164 Query 66926 GAGTAATTGAAATCG 66940 ||| ||||||| Sbjct 5163 TTGTAGCCGAAATCG 5149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397544824643120