Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq31 140 5e-31 seq26 140 5e-31 seq22 140 5e-31 seq20 140 5e-31 seq17 140 5e-31 seq5 140 5e-31 seq3 140 5e-31 >seq31 Length=25115 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 9566 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 9509 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 9508 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 9449 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 9448 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 9395 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 19368 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 19311 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 19310 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 19251 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 19250 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 19197 >seq26 Length=28716 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 2847 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 2790 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 2789 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 2730 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 2729 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 2676 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 12652 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 12595 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 12594 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 12535 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 12534 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 12481 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 22458 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 22401 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 22400 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 22341 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 22340 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 22287 >seq22 Length=31363 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 9422 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 9365 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 9364 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 9305 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 9304 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 9251 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 19225 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 19168 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 19167 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 19108 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 19107 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 19054 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 29028 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 28971 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 28970 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 28911 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 28910 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 28857 >seq20 Length=21657 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 21136 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 21193 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 21194 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 21253 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 21254 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 21307 >seq17 Length=3664704 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 3664184 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 3664241 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 3664242 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 3664301 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 3664302 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 3664355 >seq5 Length=35349 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 9355 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 9298 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 9297 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 9238 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 9237 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 9184 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 19157 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 19100 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 19099 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 19040 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 19039 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 18986 Score = 140 bits (154), Expect = 5e-31 Identities = 142/176 (81%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 28957 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 28900 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 28899 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 28840 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 28839 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 28786 >seq3 Length=19025 Score = 140 bits (154), Expect = 5e-31 Identities = 143/176 (81%), Gaps = 8/176 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 14624 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 14567 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | Sbjct 14566 GCCGCGAAGCTACCA-CTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 14508 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 14507 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 14454 Score = 127 bits (140), Expect = 3e-27 Identities = 141/176 (80%), Gaps = 9/176 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||| |||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 5159 GTACGA-AGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATC-GGCAAT 5104 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| ||| | Sbjct 5103 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 5044 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCG-GATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| || ||| |||||| | || | |||| |||||||| Sbjct 5043 GAA-ACGATGATGTTAGTCCCGCGAATCTTAGTCGAGTTAAG-ATAGAGCTTCGGC 4990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199706368