Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1625 538 1e-150 >seq1625 Length=9935 Score = 538 bits (596), Expect = 1e-150 Identities = 535/683 (78%), Gaps = 51/683 (7%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||||||| Sbjct 4488 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAATTGGGTGGTAAATTCCATCTAAAG 4429 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct 4428 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 4369 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 |||||||||||||||| | | |||||||||||||| ||||||| |||||| | |||||| Sbjct 4368 TTGGAAAGAGAGTTAACA-GTACGTGAAATTGTTGGAAGGGAAACGCTTGAAGTCAGACT 4310 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTC--TGCGGTCAGGCCAGC 271 ||| | | ||| ||| |||| | ||||| | || ||||||||| Sbjct 4309 TGCATTTTGGAGTTCAGCCGCAA--------GGTGTATTCTTCAATTCG--CAGGCCAGC 4260 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGG---GAATGTGGCCCCCTTCGGGGGGTGTT 328 ||||| | | || ||| |||| | ||| ||| || || || || ||||| Sbjct 4259 ATCAGTTTTTGGGGGTGGA-AAAG--CGCGGTTCGAAGGTAGCAGTCTC--GGCTGTGTT 4205 Query 329 ATAGC---CCG--GGGT----------GGAATGCGGCCCGCC-TGGACTG------AGGT 366 ||||| ||| || | ||| || || ||| | ||| || | Sbjct 4204 ATAGCTTGCCGCTGGATTCACTTTTGGGGACTGAGGAACGCAGTACACTTTTTGCAAGAT 4145 Query 367 CCGCGC-----TCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAAC 420 | || || || |||||||||| | ||||| | ||| || ||||||||| ||| Sbjct 4144 TCTCGGATCTTTCGTACTTAGGATGCTGGTGGAATGGCTTTAAACGACCCGTCTTGAAAC 4085 Query 421 ACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATG 480 ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct 4084 ACGGACCAAGGAGTCTAACATGCTTGCGAGTGTTTGGGTGTTAAACCCGGACGCGTAATG 4025 Query 481 AAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG 540 |||||||| |||||||||| || | ||||||||||||||||||| ||| | | | Sbjct 4024 AAAGTGAATGGAGGTGGGATCCGC--AAGGTGCACCATCGACCGATCTGGATTTTCTAAG 3967 Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3966 ATGGATTTGAGTAAGAGCAATTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 3907 Query 601 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 3906 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATC 3847 Query 661 GTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||| Sbjct 3846 GTCAAATTTGGGTATAGGGGCGA 3824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079920098750