Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1625 293 4e-77 >seq1625 Length=9935 Score = 293 bits (324), Expect = 4e-77 Identities = 188/204 (92%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT- 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 5718 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTA 5659 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 | ||||||||||||||||| | |||||||||||| ||||||||||||| |||||||||| Sbjct 5658 TTTTCACCTTGGCCGGAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGATGGGGATAGA 5599 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||||||| ||||||||||||||| ||||||||||| | ||||||| |||| Sbjct 5598 ACATTGCAATTATTGTTCTTCAACGAGGAATACCTAGTAAGCGTGATTCATCAGATCGCG 5539 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 5538 TTGATTACGTCCCTGCCCTTTGTA 5515 Score = 122 bits (134), Expect = 2e-25 Identities = 92/107 (86%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| | ||| |||||||| || || | |||||||| Sbjct 6515 GAACGAGACCTTAACCTGCTAAATAGTCCCGCCGGCTTTGGCTGGCGGCTGACTTCTTAG 6456 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||| || | ||| |||||||||||||||||||||||||| Sbjct 6455 AGGGACTATCAGCGTTTAGCTGATGGAAGTTTGAGGCAATAACAGGT 6409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947164716800