Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1625 131 3e-28 seq3408 116 6e-24 >seq1625 Length=9935 Score = 131 bits (144), Expect = 3e-28 Identities = 99/114 (87%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| |||||||| |||||||||||| || | |||| | Sbjct 112 GTACGAGAGGAACCGTTGA-TTCACG-TAATTGGTATTTGCGGCTGTCCGATCGGGCAAT 55 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||||| || ||||||||||||||||||||||||| |||||||| Sbjct 54 GCCGCGAAGCTACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCC 1 >seq3408 Length=757 Score = 116 bits (128), Expect = 6e-24 Identities = 116/144 (81%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 33 GGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCT 92 ||| |||||||||||| || | |||| |||||||||||||||| || |||||||||||| Sbjct 757 GGTATTTGCGGCTGTCCGATCGGGCAATGCCGCGAAGCTACCACGTGTTGGATTATGGCT 698 Query 93 GAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGAT-TCTCTCCTGCACATCGTAG 151 ||||||||||||| |||||||| ||| |||| | |||| | ||| || ||| ||| Sbjct 697 GAACGCCTCTAAGCCAGAATCCGTGCTAGAA-ACGATGATGTTAGTCCCGCGAATCTTAG 639 Query 152 TCG-GATACGAATAG-GCTTCGGC 173 ||| | || | |||| |||||||| Sbjct 638 TCGAGTTAAG-ATAGAGCTTCGGC 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819170438400