Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3232 262 3e-65 >seq3232 Length=25038 Score = 262 bits (290), Expect = 3e-65 Identities = 773/1171 (66%), Gaps = 44/1171 (4%) Strand=Plus/Minus Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 ||| ||||||| ||| | | || | |||||| |||||||| ||||| || |||||| Sbjct 4088 TCGAACGGCATCGCCAACGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGATG 4029 Query 65843 GGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || || || || || ||||| ||| |||||| || || ||||| |||| ||||| Sbjct 4028 GGGCGGTGGCGGAAGTTGGAGT-TCTGCGCCTCGATGACGGGATAGTAGTTGACGTCGAT 3970 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960 ||||| ||||| ||| | || || | |||| ||| |||| | | || || Sbjct 3969 GATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGT-GCAACTTCTTAAAGTC-- 3913 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 || | | || || || || || || || || | | | || || | Sbjct 3912 ---GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGAGGCCA 3869 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTAC 66080 ||||||||| || ||| || || || | ||||||| || |||||||||| || | Sbjct 3868 AGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTT-C 3810 Query 66081 TGCAGCGT-ATGGTGCCCAAATTCTGTTGATTAC-TCTTGCGATTGCATGCATCCTTGTA 66138 | | | || ||||| | |||| ||| || | || | |||| || |||||||| Sbjct 3809 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG-GCGTCCTTGTA 3751 Query 66139 CATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA----G 66194 | |||| |||| ||||||| || || |||| |||| || |||| |||||| | Sbjct 3750 GAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTG 3691 Query 66195 CGCGTGCCT--TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 |||| | | || | | | | ||||| ||||| ||||| | ||| | | | Sbjct 3690 CGCGGGGATCGTCTTCTTG-GCGCGGCCCT-CCTTT----TCGTATTTCTCGAACAAGGC 3637 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA-CACATCAGCG 66311 ||| ||| || | |||||| || | || ||| | || || | || | Sbjct 3636 GCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCAGCGGGGCAGAAGAGGG 3578 Query 66312 ACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||| || | | || ||||| |||||| ||||| || |||||||| || ||| Sbjct 3577 GCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGA 3518 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 ||||||| || || || |||||| ||||||| || ||||| | ||| |||||||| | Sbjct 3517 AGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGA 3458 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||| ||| || |||||||| || |||||||| ||||| | || ||| ||| ||||| Sbjct 3457 AGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCAC 3398 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 |||||||||||||||| ||| |||||| ||||||| | ||| || |||| ||||| | Sbjct 3397 CTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCG 3338 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 | | ||| || |||||| ||||| || || || || || | ||| | ||| || Sbjct 3337 AGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAAC 3278 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCC 66669 | ||||||||||| ||||| |||||| ||| | || | | || | | ||||| Sbjct 3277 CGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAGATGCC 3220 Query 66670 GTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGT 66729 || || ||||| |||| ||||| | ||| | || || ||| || || | || || Sbjct 3219 TTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGT 3160 Query 66730 GGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTA 66789 |||| |||||| || || | ||||| |||||||| | |||||| ||||| Sbjct 3159 TCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTA 3100 Query 66790 CGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAG 66849 || || | ||| || |||| | || || || |||| || ||||| || | Sbjct 3099 CGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCAT 3040 Query 66850 GTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909 || ||| || |||||| | | | | | ||| | | ||||||||||| || || || Sbjct 3039 GTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGT 2980 Query 66910 CTTGATACCAAAGTACGAGTAATTGAAATCG 66940 ||||| |||||||| ||| ||||||| Sbjct 2979 CTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 2949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397549951034000