Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq63 78.8 2e-12 >seq63 Length=38140 Score = 78.8 bits (86), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 10/223 (4%) Strand=Plus/Minus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||||||||||| | ||| ||||||| |||||||||| ||| ||| Sbjct 5576 TCGCCGTGGTTGCCCTGATGACCGGTCACACCGAACATTCGCTCCTTGAGGATCGAGTCG 5517 Query 110 -CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCC----TTGTCACTGAACC 164 ||| | |||||||| | | | | |||| || ||| |||||||||| | Sbjct 5516 ACGC-CATTCCACAGACCGACGGAAAAGCACATGCG----GCCATGGTTGTCACTGATAC 5462 Query 165 CCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGT 224 | || || || ||||| ||||| ||||| || || || ||||| || || ||||||| Sbjct 5461 CGGCGAGTCCATCCTCTCCCCAGCGGTACGCTCGCGAACGAGCATGTTCGTGAGGGAAGT 5402 Query 225 AGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGT 267 || |||||| || |||| || |||||| ||||| || || Sbjct 5401 GGGACCAGGCATCCCCATTCGCCGAGTAGTCCTCGCGGACGGT 5359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007813933280