Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016705.1_202016-07-09] 18,459 sequences; 26,753,668 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq15836 253 6e-65 seq4594 158 4e-36 >seq15836 Length=219 Score = 253 bits (280), Expect = 6e-65 Identities = 157/167 (94%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 218 TTTTCAGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAGTAAGGTACCATCAA 159 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 |||||| ||| ||||||||||||||||||||||||||||| || | |||||||| |||| Sbjct 158 ATAAACTATAGCTGATTTAATGAGCCATTCGCAGTTTCACCGTTT--ATTGCTTAAACTT 101 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 100 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 54 >seq4594 Length=528 Score = 158 bits (174), Expect = 4e-36 Identities = 135/165 (82%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| |||||||| |||||||||| || ||||||||||||||| || Sbjct 364 GTACTCATTCCAATTGCAAGACCCGTAAGAGCCCTGCATTGTTATTTATTGTCACTATCT 423 Query 61 CCCC---GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT-TCCTTGGATGTGGTAGC 116 | | |||| | | || ||||||||||||||||||| | ||||| || || || Sbjct 424 CGGCAAAGTGTTGCCAGGGGATAATTTGCGCGCCTGCTGCGTGTCCTTAGACCTGAGGGC 483 Query 117 CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 |||||||||||| | ||||||||||||||||||| |||||||||| Sbjct 484 CGTTTCTCAGGCCCTCTCTCCGGAATCGAACCCTTATTCCCCGTT 528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510121195264