Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016725.1_202016-07-08] 5,202 sequences; 26,456,369 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq972 408 2e-111 >seq972 Length=2570 Score = 408 bits (452), Expect = 2e-111 Identities = 274/305 (90%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||||||| | ||||| | ||| || ||||||||| ||||||||||||||||||||| Sbjct 1543 TAGGATGCTGGTGGAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 1484 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1483 CATGTTTGCGAGTGTTTGGGTGTCAAACCCGGACGCGTAATGAAAGTGAATGGAGGTGGG 1424 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || | ||||||||||||||||||| ||| | | ||||||||||||||||||| Sbjct 1423 ATCCGC--AAGGTGCACCATCGACCGATCTGGATTTTCTAAGATGGATTTGAGTAAGAGC 1366 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1365 AATTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 1306 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 1305 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 1246 Query 679 GGCGA 683 ||||| Sbjct 1245 GGCGA 1241 Score = 237 bits (262), Expect = 7e-60 Identities = 163/183 (89%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||||||| Sbjct 1905 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAATTGGGTGGTAAATTCCATCTAAAG 1846 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||| Sbjct 1845 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 1786 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 |||||||||||||| || || |||||||||||||| ||||||| |||||| | |||||| Sbjct 1785 TTGGAAAGAGAGTT-AACAGTACGTGAAATTGTTGGAAGGGAAACGCTTGAAGTCAGACT 1727 Query 214 TGC 216 ||| Sbjct 1726 TGC 1724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079888417100