Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016725.1_202016-07-08] 5,202 sequences; 26,456,369 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq424 244 8e-60 >seq424 Length=13803 Score = 244 bits (270), Expect = 8e-60 Identities = 426/615 (69%), Gaps = 6/615 (1%) Strand=Plus/Plus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| ||| || ||||| || |||||||| || |||||||||| || || || Sbjct 10837 TCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGA 10896 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||||| ||||||| || ||||| | ||| ||||| || |||| |||||| ||||| Sbjct 10897 ACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAATTCGAAGACGTCGGCGTGCCAC 10956 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || || |||||||| ||||| | || ||| ||| ||||||||||||||||||||| Sbjct 10957 GGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGC 11016 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 ||| |||||| ||||||| | ||| || || | ||||| || | ||| || |||||| Sbjct 11017 GCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTTGTGCCG 11076 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 ||||| ||| || || || || | ||| | ||| ||| ||||| ||||| ||| Sbjct 11077 GCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCGCCGGCGGTC 11136 Query 66629 TTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || |||||| ||| | || | | || | | ||||| ||||| || ||| ||| Sbjct 11137 TTGGAGATG--AGCGCGCACGTCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 11194 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || || | ||| | || || ||| || || | || || |||| |||||| | Sbjct 11195 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 11254 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||||| |||||||| | ||||| ||||||| || | ||| | Sbjct 11255 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCT 11314 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865 |||||| | || || || |||| || ||| ||||| || | || ||| || |||||| Sbjct 11315 CAATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATGAGCATGTGTTGCGGGCGTTCG 11373 Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925 | | | | | ||| | | |||||||||||||| || || |||| |||||||| Sbjct 11374 GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGTTCGAGCGTTTTGAAGCCAAAGTAG 11433 Query 66926 GAGTAATTGAAATCG 66940 ||| ||||||| Sbjct 11434 TTGTAGCCGAAATCG 11448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397542794437280