Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq132 120 7e-25 seq62 120 7e-25 seq54 120 7e-25 seq35 120 7e-25 >seq132 Length=25155 Score = 120 bits (132), Expect = 7e-25 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| | | |||||| ||| |||| | |||||| | |||| |||| |||||||||| Sbjct 21624 GAATTTCAAAAGTAGCGCTGATATGCTTTGATATTTGAAGGACTACCAATGGCGAAGGCA 21683 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | || || | | ||||| ||||| ||||||||| || ||||||||| ||||||| Sbjct 21684 GATTACTAATTAGAGATTGACATTGAGGTACGAAAGCGTAGGTAGCAAACAGAATTAGAT 21743 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGA 337 || ||||||||| |||| ||||||||||| Sbjct 21744 ACTCTGGTAGTCTACGCTGTAAACGATGA 21772 >seq62 Length=34072 Score = 120 bits (132), Expect = 7e-25 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| | | |||||| ||| |||| | |||||| | |||| |||| |||||||||| Sbjct 13548 GAATTTCAAAAGTAGCGCTGATATGCTTTGATATTTGAAGGACTACCAATGGCGAAGGCA 13607 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | || || | | ||||| ||||| ||||||||| || ||||||||| ||||||| Sbjct 13608 GATTACTAATTAGAGATTGACATTGAGGTACGAAAGCGTAGGTAGCAAACAGAATTAGAT 13667 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGA 337 || ||||||||| |||| ||||||||||| Sbjct 13668 ACTCTGGTAGTCTACGCTGTAAACGATGA 13696 >seq54 Length=37873 Score = 120 bits (132), Expect = 7e-25 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| | | |||||| ||| |||| | |||||| | |||| |||| |||||||||| Sbjct 13325 GAATTTCAAAAGTAGCGCTGATATGCTTTGATATTTGAAGGACTACCAATGGCGAAGGCA 13266 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | || || | | ||||| ||||| ||||||||| || ||||||||| ||||||| Sbjct 13265 GATTACTAATTAGAGATTGACATTGAGGTACGAAAGCGTAGGTAGCAAACAGAATTAGAT 13206 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGA 337 || ||||||||| |||| ||||||||||| Sbjct 13205 ACTCTGGTAGTCTACGCTGTAAACGATGA 13177 Score = 120 bits (132), Expect = 7e-25 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| | | |||||| ||| |||| | |||||| | |||| |||| |||||||||| Sbjct 34843 GAATTTCAAAAGTAGCGCTGATATGCTTTGATATTTGAAGGACTACCAATGGCGAAGGCA 34902 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | || || | | ||||| ||||| ||||||||| || ||||||||| ||||||| Sbjct 34903 GATTACTAATTAGAGATTGACATTGAGGTACGAAAGCGTAGGTAGCAAACAGAATTAGAT 34962 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGA 337 || ||||||||| |||| ||||||||||| Sbjct 34963 ACTCTGGTAGTCTACGCTGTAAACGATGA 34991 >seq35 Length=16891 Score = 120 bits (132), Expect = 7e-25 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| | | |||||| ||| |||| | |||||| | |||| |||| |||||||||| Sbjct 15099 GAATTTCAAAAGTAGCGCTGATATGCTTTGATATTTGAAGGACTACCAATGGCGAAGGCA 15158 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | || || | | ||||| ||||| ||||||||| || ||||||||| ||||||| Sbjct 15159 GATTACTAATTAGAGATTGACATTGAGGTACGAAAGCGTAGGTAGCAAACAGAATTAGAT 15218 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGA 337 || ||||||||| |||| ||||||||||| Sbjct 15219 ACTCTGGTAGTCTACGCTGTAAACGATGA 15247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203198062848