Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq36 269 2e-67 >seq36 Length=1210608 Score = 269 bits (298), Expect = 2e-67 Identities = 811/1236 (66%), Gaps = 46/1236 (4%) Strand=Plus/Minus Query 65719 CTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATC 65778 ||||| ||||| || ||||||||||| || | || || | || |||||| Sbjct 5855 CTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCAGG 5796 Query 65779 GCTCTCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATA 65836 ||| ||||||| ||| ||| || || | ||||| |||||||| ||||| || Sbjct 5795 CGAATCGAACGGCATCGCCA--AGGCCATGAACGCATCGGCGAGACCTTGCACTCCGATG 5738 Query 65837 CCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATA 65896 |||||||| || || || || |||||| | |||||| || |||||||| |||| Sbjct 5737 CCGATGGGGCGGTGGCGGAAGTTGGAATTTTGCGCCTCGATGACGGGGTAGTAGTTGACG 5678 Query 65897 TCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAA 65955 ||||| ||||| ||||| || | || || | |||| ||| ||| | || ||| Sbjct 5677 TCGATGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTCGT-GCAGCTTTTTGAA 5619 Query 65956 ATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGA 66015 || || | | || || || || || || || || | | | || Sbjct 5618 GTC-----GTACACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGA 5577 Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAG 66075 || | |||||||||||| |||||| ||||| | ||||||| || ||||||||||| Sbjct 5576 AGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCGGTGCACAG 5517 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT--ACTCTTGCGATTGCATGCATCC 66133 || | || ||||| | |||| ||| || ||| || | | || || ||| Sbjct 5516 GTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTT-GTTCGCG-GCGTCC 5459 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||| | |||| | || |||||||||| || |||| ||| | ||| |||| |||||| Sbjct 5458 TTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAAAGC 5399 Query 66194 ----GCGCGTGCCTTCACCGTACGTACCGC--CCTACCTTTGCGTTCGTAATGTTCGTAG 66247 ||||| | | | | | | ||| || ||||| ||||| | ||| | Sbjct 5398 TTTTGCGCGGGGATGGTC--TTCTTGGCGCGACCCTCCTTT----TCGTACTTCTCGAAC 5345 Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307 ||| ||| ||| || | |||||| || | || || | || || | Sbjct 5344 AGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAG 5285 Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367 || | ||| || || | || ||||| ||| || ||||| || |||||||| || Sbjct 5284 AGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCA 5225 Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 |||||||||| || || || || || |||||||||| ||||| | ||| |||||| Sbjct 5224 AAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAAC 5165 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 || |||| |||||| ||||| || || |||||||| ||||| | || ||| ||| | Sbjct 5164 TCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 5105 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 |||||||||||||||||||| ||| |||||| |||| |||| ||| || |||| || Sbjct 5104 CCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCA 5045 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTC 66607 || || | ||| || |||||| ||||| ||| || || || || | ||| | | Sbjct 5044 TTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTT 4985 Query 66608 AGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATA 66665 | ||| ||||||||||| ||||| |||||| ||| | || | | || | | | Sbjct 4984 AAACCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAGA 4927 Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725 |||| ||||| ||||| |||| || || | | | |||| || || || || | | Sbjct 4926 TGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAG 4867 Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785 | || |||| |||||| || || | ||||| || ||||| | |||||| | Sbjct 4866 GGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGT 4807 Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATC 66844 |||| | || | ||| || |||| | || || || |||| || ||| ||||| Sbjct 4806 TGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACA-CGCATG 4748 Query 66845 AGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCC 66904 || | || || || |||||| | | | | | ||| | | ||||||||||| || Sbjct 4747 AGCATGTGCTGCGGACGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCG 4688 Query 66905 AGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || ||||||| ||||| || ||| ||||||| Sbjct 4687 AGTGTCTTGAAGCCAAAATAGTTGTAGCCGAAATCG 4652 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || || || |||||||||||||| ||||||||| |||||| | | ||| ||| Sbjct 55431 TACATCGAGTTTGTTGCCGACCGATTGTTGGTCGCTTTGGGCAACCCCAAGGTCTGGAAT 55372 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 | | ||||| ||||| |||||| ||||||| ||||| || ||||| || || || ||| Sbjct 55371 GCTGAGAACCCCTTTGACTTCATGAACATGATCTCGCTCGAGGGCAAAACAAACTTCTTC 55312 Query 61909 GAGAAACGTGT 61919 ||||| ||||| Sbjct 55311 GAGAAGCGTGT 55301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567404020720