Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900009495.1_202016-12- 23] 223 sequences; 35,405,415 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq66 89.7 7e-13 >seq66 Length=711016 Score = 89.7 bits (98), Expect = 7e-13 Identities = 228/340 (67%), Gaps = 8/340 (2%) Strand=Plus/Minus Query 162526 TATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTAC 162585 || || || || ||||| ||||| || || | || | |||||||| |||| |||||| Sbjct 647042 TACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATTGTCAAGAACTAC 646983 Query 162586 AGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGC 162645 | || || | ||| | || | | |||||| | ||||| ||||| | | || Sbjct 646982 CGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAACCACGAGTCCCCGCGT 646923 Query 162646 AGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTC-CCGAATTAGTG-TGG 162703 | || || || ||||| | |||||| |||||| |||| |||| | | | | Sbjct 646922 CGTGGTCGCACCTTTGTCACGAGGAAGATCTCCCGAGC--TGTCGCCGAGATCTCGCTCG 646865 Query 162704 GACTCCAA-AGTGA-TCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGC 162761 | | || | || ||||| || || || | | ||| ||||| ||||||||||| Sbjct 646864 GTCAACAGGACTGCCTCTAC--CTCGGCAATATGGAGGCCAAGCGTGATTGGGGACACGC 646807 Query 162762 CAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGT 162821 | |||||||| |||| ||||||| |||| | |||||||| ||||| || || | ||| Sbjct 646806 CGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGCAAGACAAGCCCGACGACTTTGT 646747 Query 162822 GATCGCAACTGGTGAGCAGTATTCTGTAAAGGACTTTGTT 162861 |||| || |||||| | |||| ||||| || ||| Sbjct 646746 CCTCGCGACGGGTGAGACCCACCCTGTCAAGGAGTTCGTT 646707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691457272557480