Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900011735.1_202016-12- 23] 157 sequences; 32,762,276 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq46 242 3e-59 >seq46 Length=827519 Score = 242 bits (268), Expect = 3e-59 Identities = 771/1173 (66%), Gaps = 48/1173 (4%) Strand=Plus/Plus Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||| ||||||| ||| ||| || || | |||||| |||||||| ||||| || |||| Sbjct 799723 TCGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGA 799780 Query 65841 TGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 |||| || || || || ||||| ||| |||||| || || ||||| || | ||| Sbjct 799781 TGGGGCGGTGGCGGAAGTTGGAGT-TCTGCGCCTCGATGACGGGATAGTAGTTAACGTCG 799839 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCA 65959 || ||||| ||||| ||| | || || | |||| | ||| || || Sbjct 799840 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGA--CCTCG----TG--------CA 799885 Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019 | | || | | ||| || |||| | | || | || | || | || || Sbjct 799886 ACTTCTTAAAG----TCGTAAGCGCCGTTCTTGATGAAGCTCGGCAACGCGATCGAGGCC 799941 Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079 | ||||||||| || |||||| || || | ||||||| || ||||||||||| || Sbjct 799942 AAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTT- 800000 Query 66080 CTGCAGCGT-ATGGTGCCCAAATTCTGTTGATTAC-TCTTGCGATTGCATGCATCCTTGT 66137 | | | | || ||||| | |||| ||| || | || | | || || || |||| Sbjct 800001 CGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTCGCG-GCGTCTTTGT 800059 Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA---- 66193 | | |||| | || |||| || || || |||| |||| || |||| |||||| Sbjct 800060 AGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGTTTTT 800119 Query 66194 GCGCGTGCCT--TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 ||||| | | || | | | | ||||| ||||| ||||| | |||| | | | Sbjct 800120 GCGCGGGGATCGTCTTCTTG-GCGCGGCCCT-CCTTT----TCGTATTTTTCGAACAAGG 800173 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA-CACATCAGC 66310 ||| ||| || | |||||| || | || ||| | || || | || Sbjct 800174 CGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCAGCGGGGCAGAAGAGG 800232 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| || || | || ||||| |||||| ||||| || |||||||| || || Sbjct 800233 GGCCACTCGCCGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAG 800292 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 |||||||| || || || ||||| |||| || || ||||| | ||| |||||||| Sbjct 800293 AAGAGATCACGAGCGCGGACTTCCTCCTTGCCATGGTTCTTGCGAAGGTCCAGGAACTCG 800352 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 |||| ||| || |||||||| || |||||||| ||||| | || ||| ||| |||| Sbjct 800353 AAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCA 800412 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 ||||||||||||||||| ||| |||||| ||||||| | ||| || |||| ||||| Sbjct 800413 CCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTC 800472 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | ||| || ||||| ||||| ||| || || || || | ||| | ||| | Sbjct 800473 GAGTAGCCGTTCGTGCCCGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAA 800532 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGC 66668 || ||||||||||| ||||| |||||| ||| | || | | || | | |||| Sbjct 800533 CCGATACCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTGTCGTAGATGC 800590 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 | ||||| || ||| |||| || || | ||| | || || ||| || || | || | Sbjct 800591 CTTCAATCGAATCATCCTTCATCGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCG 800650 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGT 66788 | |||| |||||| || || | ||||| || ||||| | ||||||| |||| Sbjct 800651 TTCCGGCATTGAAGAGTGTCGGCGAGGCGTGGGTGAAGTAGCGCTCAGACATGAGGTTGT 800710 Query 66789 ACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGG 66847 ||| | | ||| || |||| | ||||| || || | || ||| ||||| || Sbjct 800711 ACGATTGCAAGACGCGCTCGATGTCGTGACCATGGATGCCAACGGCGACA-CGCATGAGC 800769 Query 66848 AGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGG 66907 | || || || |||||| | | | | | ||| | | ||||||||||| || || Sbjct 800770 ATGTGCTGCGGGCGTTCGGCTACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGC 800829 Query 66908 GTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || |||| |||||||| ||| ||||||| Sbjct 800830 GTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 800862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567239278480