Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq36 329 6e-88 seq15 329 6e-88 >seq36 Length=474693 Score = 329 bits (364), Expect = 6e-88 Identities = 254/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| |||| |||||||||| | || ||||| Sbjct 6584 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTTACTGGGTGTGGTAGCGAACCAGG 6525 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 6524 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 6465 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 6464 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 6405 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 6404 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 6345 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 6344 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 6287 >seq15 Length=534025 Score = 329 bits (364), Expect = 6e-88 Identities = 254/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| |||| |||||||||| | || ||||| Sbjct 497011 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTTACTGGGTGTGGTAGCGAACCAGG 497070 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 497071 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 497130 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 497131 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 497190 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 497191 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 497250 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 497251 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 497308 Score = 329 bits (364), Expect = 6e-88 Identities = 254/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| |||| |||||||||| | || ||||| Sbjct 508830 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTTACTGGGTGTGGTAGCGAACCAGG 508889 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 508890 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 508949 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 508950 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 509009 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 509010 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 509069 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 509070 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 509127 Score = 329 bits (364), Expect = 6e-88 Identities = 254/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| |||| |||||||||| | || ||||| Sbjct 520662 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTTACTGGGTGTGGTAGCGAACCAGG 520721 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 520722 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 520781 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 520782 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 520841 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 520842 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 520901 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 520902 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 520959 Score = 329 bits (364), Expect = 6e-88 Identities = 254/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| |||| |||||||||| | || ||||| Sbjct 532522 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTTACTGGGTGTGGTAGCGAACCAGG 532581 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 532582 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 532641 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 532642 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 532701 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 532702 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 532761 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 532762 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 532819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199661376